Understanding how trees build wood is central to forestry science, yet many of the molecular signals that control this process remain unknown. In his research, Eugene Badenhorst is investigating the primary-to-secondary growth transition in Eucalyptus, a key developmental switch that marks the beginning of wood formation.

While traditional methods such as bulk RNA sequencing provide useful insights into gene activity, they lack spatial resolution, meaning important details about where genetic changes occur within tissues are lost. To overcome this limitation, Eugene applies a spatial transcriptomics approach, a technology that retains the structure of plant tissues while capturing millions of gene expression signals from individual cells.
By integrating spatial transcriptomics with anatomical and biochemical analyses on Eucalyptus grandis clones, his work aims to produce the first spatially resolved model of wood initiation in any tree species. This integrated dataset will form a 4D blueprint of wood formation, linking molecular activity to cellular structure and developmental time.


